20 May 2019 Download URL: Link to the database ( .feather file, and its size). Mouse, Genes, 500bpUp100Dw, mc9nr, mm10 (refseq_r80)�
20 May 2019 Download URL: Link to the database ( .feather file, and its size). Mouse, Genes, 500bpUp100Dw, mc9nr, mm10 (refseq_r80)� The function cisTarget() allows to perform the motif-enrichment analysis on a gene list. Prior to running RcisTarget, you will need to download and install the Once you have the .feather files, they can be loaded with importRankings() : Errors reading the .feather databases; Cannot download the databases and annotation files is available at: https://resources-mirror.aertslab.org/cistarget/� These objects are provided in separate files, which can be imported with -10kb-7species.mc9nr.feather[mm9-tss-centered-10kb-7species.mc9nr] (Mouse, 10kbp) around TSS # (See the vignette for URLs to download) motifRankings� Download BED files with candidate regulatory regions. Human CRRs (hg19, RefSeq r45) - a set of 1.223.024 candidate regulatory regions for human i-cisTarget�
20 May 2019 Download URL: Link to the database ( .feather file, and its size). Mouse, Genes, 500bpUp100Dw, mc9nr, mm10 (refseq_r80)� The function cisTarget() allows to perform the motif-enrichment analysis on a gene list. Prior to running RcisTarget, you will need to download and install the Once you have the .feather files, they can be loaded with importRankings() : Errors reading the .feather databases; Cannot download the databases and annotation files is available at: https://resources-mirror.aertslab.org/cistarget/� These objects are provided in separate files, which can be imported with -10kb-7species.mc9nr.feather[mm9-tss-centered-10kb-7species.mc9nr] (Mouse, 10kbp) around TSS # (See the vignette for URLs to download) motifRankings� Download BED files with candidate regulatory regions. Human CRRs (hg19, RefSeq r45) - a set of 1.223.024 candidate regulatory regions for human i-cisTarget� Imports AUCell (>= 1.1.6), BiocGenerics, data.table, feather, graphics, GSEABase (or load previous results) load(paste(file.path(system.file(examples, package=RcisTarget)), (See the vignette for URLs to download) cisTarget. 13. ## Motif rankings: Select according to organism and distance around TSS. ## (See the� cisTopic: Probabilistic modelling of cis-regulatory topics from single cell epigenomics data - aertslab/cisTopic
20 May 2019 Download URL: Link to the database ( .feather file, and its size). Mouse, Genes, 500bpUp100Dw, mc9nr, mm10 (refseq_r80)� The function cisTarget() allows to perform the motif-enrichment analysis on a gene list. Prior to running RcisTarget, you will need to download and install the Once you have the .feather files, they can be loaded with importRankings() : Errors reading the .feather databases; Cannot download the databases and annotation files is available at: https://resources-mirror.aertslab.org/cistarget/� These objects are provided in separate files, which can be imported with -10kb-7species.mc9nr.feather[mm9-tss-centered-10kb-7species.mc9nr] (Mouse, 10kbp) around TSS # (See the vignette for URLs to download) motifRankings� Download BED files with candidate regulatory regions. Human CRRs (hg19, RefSeq r45) - a set of 1.223.024 candidate regulatory regions for human i-cisTarget� Imports AUCell (>= 1.1.6), BiocGenerics, data.table, feather, graphics, GSEABase (or load previous results) load(paste(file.path(system.file(examples, package=RcisTarget)), (See the vignette for URLs to download) cisTarget. 13. ## Motif rankings: Select according to organism and distance around TSS. ## (See the� cisTopic: Probabilistic modelling of cis-regulatory topics from single cell epigenomics data - aertslab/cisTopic
Imports AUCell (>= 1.1.6), BiocGenerics, data.table, feather, graphics, GSEABase (or load previous results) load(paste(file.path(system.file(examples, package=RcisTarget)), (See the vignette for URLs to download) cisTarget. 13. ## Motif rankings: Select according to organism and distance around TSS. ## (See the�
20 May 2019 Download URL: Link to the database ( .feather file, and its size). Mouse, Genes, 500bpUp100Dw, mc9nr, mm10 (refseq_r80)� The function cisTarget() allows to perform the motif-enrichment analysis on a gene list. Prior to running RcisTarget, you will need to download and install the Once you have the .feather files, they can be loaded with importRankings() : Errors reading the .feather databases; Cannot download the databases and annotation files is available at: https://resources-mirror.aertslab.org/cistarget/� These objects are provided in separate files, which can be imported with -10kb-7species.mc9nr.feather[mm9-tss-centered-10kb-7species.mc9nr] (Mouse, 10kbp) around TSS # (See the vignette for URLs to download) motifRankings� Download BED files with candidate regulatory regions. Human CRRs (hg19, RefSeq r45) - a set of 1.223.024 candidate regulatory regions for human i-cisTarget� Imports AUCell (>= 1.1.6), BiocGenerics, data.table, feather, graphics, GSEABase (or load previous results) load(paste(file.path(system.file(examples, package=RcisTarget)), (See the vignette for URLs to download) cisTarget. 13. ## Motif rankings: Select according to organism and distance around TSS. ## (See the�
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